Straight is straight. Or is it?
The important thing is to be able to get the neck straight under string tension. None of the above methods is guaranteed to make that happen. Might work. Maybe.
The only sure way to do this is to be able to jig the neck in the playing position (
almost vertical)with the strings on and then convert that to work position (horizontal). Check out the
neck jig at Stewart-MacDonald. Proper use of a jig will get the neck straight every time. Without the jig, chances are that the neck will never be straight under string tension. And that is the way the guitar is played, under string tension.
Why do this? A straight neck is the basic reference position. The strings can pull the neck into a gentle, controlled relief. If the bass is to sing and still have reasonably comfortable action this is a must. It also makes it easy to control the amount of mwah available.
Some may make the argument that all of this should be done after the epoxy is applied. I will not argue that point. It should also be done after the last coat of epoxy cures.
On a personal note, rather than slop some glue in the slots, I prefer to fill the slots with the same material as the fingerboard i.e. rosewood veneer in a rosewood board. Yellow glue, if handled properly, will work just fine in this application. Other choices of adhesives will also do well. I'm not a fan of the epoxy coat on the fingerboard. I've played them and do not hear a sonic advantage and don't see an economic advantage over playing over wood. I think that wood feels better under my fingers.