I was finally able to get this started yesterday. I sorted out the drawing problem was just basic idiocy on my part. 3/8 - 3/4 nut and bridge is what I ended up going with.
I started off with a 4" wide 3/4" thick piece of Cherry. I cant remember the exact length 46ish we'll say.
I got it all marked out for nut, bridge and truss rod.
This is how I did the truss rod. Basically I clamp the cherry down to the edge of the mdf then I set the aluminum beam to put the router bit right in the center of the neck.
Next I cut the excess from the back of the neck on the bandsaw. I left around 7/8" then cleaned it up on the bridgeport ended up with around 3/4. I planed the piece I cut out down to 5/8" I'll use part of this for the headstock.
Next up I have my scarf joint jig in two pieces so I can set it up for any size neck. To do this you need a wider router base so I outfitted my router with this cutting edge pine base using double sided tape.

Every time I do this I think to myself this is an abomination but every time it works.
For the headstock I predrilled and used nails to hold the angle perfect during the clamping. Since I keep the tape of the neck straight through the body theres plenty of extra space up by the neck. After the glue is dry I just pull the nails out with a pair of plyers.
Next I cut out the body wings from this piece of african mahogany. I tried a couple different layouts with my templates and this seemed to be the best way to go.
I cut out the wings on the bandsaw and then cleaned up the edges on the spindal sander. I normally use the router and the templates but the bit I had was pretty beat.
Onto the control cavity. Bridgeport makes pretty quick work of this. Unfortunately somehow I got an action shot and no finished shot. I leave 3/16 for the cover.
Next I will make the cover and just get that right out of the way. Then I'll put the fretboard on. I'm not sure what I will use right now. I had planned to use maple but maybe this needs a darker fretboard. what do you think?