tuxguitar... http://www.tuxguitar.com.ar/
has a fretboard input mode... where you can mouse click on the fretboard note and it'll put it in...
also reads and writes guitarpro files... and reads powertab files
enjoy 
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Tanglewood TW55 A/Bass B, Tanglewood Warrior IV, Squier VMJ, Vintage V950B, Laney RB6, Boss ME-20B, Zoom B2.1U CP&WBBC #6, ABFC #59, MBC #188
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