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Fender dead spots

I have a 5 string Jazz Bass Plus that I had pleked and refretted, it has no discernible dead spots in it.

I have heard about dead spots, especially on the G string around the 5th, what causes this and is it distinctly unique to Gender basses?
 
I also found there are one "soft spot" on E string from some Fender or Squier bass . Within 2nd fret to 7th fret.
More notable with flatwound bass string.

The note are ring right and still has the sustain , but the continuous sustain can't stay solid and keep full voice as the rest.

It is different compare to dead spot.