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fretboard change

I'd just stain it, as said above. If this is a fretted bass, then a coating wouldn't do much - the neck effects the sound of a bass by its density, not just the top layer. If this is about a fretless instrument, then you can put epoxies and what-have-you over the board but I think it would give the opposite sonic effect you're looking for.
 
Actually it's a fretted guitar that i'm redoing everything on (electronics, pickguard, paint etc) but the maple neck wouldn't fit the paint scheme. And i don't want to replace cause 1- I'm low on funds for the moment, and 2- the profile is just superb, it would be a shame to swap out the neck. and 3-it's going to be a gift for a friend of mine.