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Right Hand alternate on 1/4 notes?

I'm trying to improve my bass sight-reading and walking jazz line skills.

My question is, is it best to practice playing finger-style bass lines in 4, is it generally best to play the down beats with just the index finger, or using i-m alternation?

My tendency is to use just the index finger, so that when I anticipate a down beat, or play a triplet riff, I always end up playing index on the downbeat again. Mostly, since I'm going to spend a lot of time practicing exercises, reading notation, etc., I do not want to develop questionable habits. I'm not adverse to practicing multiple ways, if that is what people suggest.
 
The main thing is to play the music as written. The notes in the air don't care which finger you used to pluck the string.

A lot of great bass players only used one finger or only used their thumb.

Try playing the lines both ways and stick with whichever one sounds better. I tend to strictly alternate on every note, but there are always exceptions. Some bass lines it works better to play i-i-m, or i-m-m, etc.