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How do you play root/fifth/octave on fretless?

In my opinion, probably there is not a standard "mechanical/fingering" way to develop intervals intonation on fretless.
You need just to use your hear and keeping in mind just one rule: if you have lined fretless, on the first fingerboard octave usually intonation is right on the fretline and then moving step by step on the second octave the intonation usually will slightly move from the fretline to the middle, sometimes just as a regular fretted bass.
Practice scales and especially arpeggios, vertically and horizontally, great if you do arpeggio three octaves way or jump way, it will need to give you much confidence and control.
I attached a video just to give some ideas. If you need more help feel free to contact me.
 
Depending on what comes next...
1-3-4
IMG_20161001_102435.JPG

Or 1-2-3
IMG_20161001_102804.JPG
 
It depends on what style of music is being played. For the most part I use my index finger for the root and my ring finger for the others. Slower songs or ones that emphasize the MWAH are fingered with the fleshy part of the finger and are never barred. On tunes that mimic a fretted bass, barring is occasionally used.