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Same fret different string

This may seem like a stupid question, I don't know. But, when playing a song (like Plug in Baby - Muse) that uses the same fret but on different string in quite quick succession, how would I go about pulling that off with my hand? At the moment I'm putting my middle finger on the D and index on the E and moving my Index down to A when it's time to play on that, but my hand is in a really awkward + uncomfortable position, so, what else could I do to play this? I tried to use just one finger and moving it up and down but I cant pull it off properly.
 
In this particular instance (E, A, D) you also have access to open strings. I don't know the song or pattern but possibly use an open E or A as well as a combination of fretted E or A along with D. I sometimes do that, or bridge (bar?) strings with one finger.

A bit off-topic but food for thought - For me that type of pattern tends to be one of the hardest things to do on a fretless. I feel your pain....

--Kevin

EDIT: I'm also assuming you mean fretting hand, not plucking hand.
 
I personally would keep it barred, or use three fingers, like you'd make an A maj on guitar. Someone suggested that to me for a bass line for Night Moves, which is G F C F G:

G||----------------|-----------||
D||o------3-3------|-3-3------o||
A||o----------3-3--|----------o||
E||---3-3----------|-----3-3---||
(just a sample, not the complete tab)
 
The way I learned it was called finger rolling. Basically say you're playing the note on the E string and you need to play the next note on the A string you can "roll" you finger across the fretboard on to the A or the D and G if you have mutant spider fingers like I do. Or you could barr it, your call.