I've got a SRMS806 (also BH2)s coming along early next month, I'm planning to do the whole modding shebang (because I always stick my fingers where I'm not supposed to), including 2 miniswitches for series/parallel/single, maybe combined pickup wiring (series/parallel, dingwall style)
I'm not sure whether inner or outer coils sound better split, guess I'll find out!
Also I might convert it to fretless eventually. I'll keep you posted if I run into noise issues along the way
Sounds to me like a local EM interference thing- Indeed a grounding issue would be 'toggleable' by touching the strings. Some pickups are more prone to interference than others, and some areas (especially in front of a computer!) are more heavy in radiation.
A suggestion- invest in a noisegate (it's not just for people like me that run 4 distortions in a row) and use a very low setting to eliminate the noise.