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Question on replacing pickups in a FSR MIM Jazz

I have a question for the jazz bass crowd.

I recently picked up a new Fender FSR MIM Jazz. I LOVE the construction quality, fit, finish, and weight and tone. The one nit I have is that the output is a little anemic. It requires about 1/4 turn on the amps gain knob (to about 12 o'clock) to be equal to what I'm used to. I realize that the MM StingRay HH and the Geddy with DM Model Js and an Audere pre are going to be a little hotter set flat, but I still feel it's lacking ooomph. I did verify the pickup height as being correct. I'm playing in a dance/classic rock cover group through a GK MB115 combo or SVT3Pro through a 410HLF.

If I were to replace them, I know from past experience with an MIM V that the pickups are the same size on the MIM and not so on most aftermarket pickup sets. The bridge pu being slightly bigger.

At first glance, it seems that I could just get 2 neck pickups and they would fit okay. The question is, aren't the neck and bridge pickups wound opposite to cancel out each other? Would putting 2 neck pickups in eliminate this cancelling action and cause hum?

If so, I guess I'm left with the propect of using a Dremel to slightly enlarge the bridge pickup slot or remembering to crank the gain every time I use this bass.

Any recommendations?
 
I have just done this very thing. I bought a FSR MIM Jazz bass, the natural finish tort one from GC- sight unseen to have as a practice bass on the East coast(I travel there a lot.)

I put in a set of Seymour Duncan antiquities, a (real) set of Fender tuners- the proper ones, and a NOS cap on the tone circuit. And had it set up by a great luthier in Raleigh. It is really pretty kick-ass I have to say. I have been playing it a ton and am tempted to take it home to LA with me... (but then I would have to do it all over again.)

So, the Duncan's are getting the thumbs up here for sure. Don't mess w the original PU's

p.s. I am a vintage snob and have a ton of old basses, inc 60's Fenders. This thing is really pretty damn great and could hang in there with them.