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What might be causing this, and how can I fix it?

I've had short scales with tone issues on the low E, but not lower volume. Maybe do a TB search for someone else with the same bass so you can see if they have any issues with the E string?

Have you checked the bridge saddle? Maybe an issue there?
 
I had the same thing on my 5 string fretless when I switched to Bartolini Jazz pickups. The bridge pickup had practically nothing from the E string. The bridge I used had 18mm spacing. When I switched to a bridge with narrower string spacing it was fine. Basically the E string was not sitting correctly over the pickup. So maybe it's the string alignment over the pickups?
 
I have a 3 pickup Huntngton, and the output on the E string has lower output than the other 3 strings.

---I've changed the strings. Still the same.

---I changed the pots (because of the taper), so I know it wasn't anything electronic.

---I raised the pickups on the low end, THAT raised the volume on the A string proportionally to the E string, so it didn't help.

---I singled out each pickup, and the E string is lower in volume on all 3.

I'm baffled.

I've owned lots of basses. Never experienced this before.

Any thoughts?

is the problem acoustic or electric?

If it is only electric then try isolating the middle or bridge pickup and see what happens
 
I have one jazz pickup that’s much quieter on the E string and it’s because those magnets became weaker somehow. I can tell by touching them with a screwdriver. Since you say it’s all three pickups that’s likely not the cause.
Maybe rotate the pickups 180?
 
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Had that once on the E string of a 5 string J bass I loved. Nothing fixed the problem. Thinking back, the only thing that comes to mind is that there was a higher or lower density area in the neck under the nut where the E string lays, maybe even a tiny crack at that spot. Yup it's a long shot but nothing else comes to mind.
 
Abother theory: I assume you have this issue when playing open notes; i.e: if you play an open A, it generates higher output than the E. What does it happen when you play on the 12th/15th fret?

1) if you have the same problem, is a pickup issue; there is no enough capacity (may be the shape/position) in that pickup to (no pun intended) pickup the vibration; like having 5 string pickups on a 6 string bass.
2) if you don’t it could be the capacity of your cicuitry to pickuo low frequencies; or your action is high, abd you bring the string closer to the pickup and is only then that the magic happens

I hope this helps
 
I have a 3 pickup Huntngton, and the output on the E string has lower output than the other 3 strings.

---I've changed the strings. Still the same.

---I changed the pots (because of the taper), so I know it wasn't anything electronic.

---I raised the pickups on the low end, THAT raised the volume on the A string proportionally to the E string, so it didn't help.

---I singled out each pickup, and the E string is lower in volume on all 3.

I'm baffled.

I've owned lots of basses. Never experienced this before.

Any thoughts?
Sell the bass...sorted. :thumbsup:
 
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