Uh, no, the toneprints for the pedals can't be loaded in the amp, or vice versa, if that is what you mean.
I don't know as I only have the amp but not the pedals. I assumed that if:
Bass > Pedal 1 - Chorus > Pedal 2 - Delay > Pedal 3 - Flanger > Amp - Overdrive Tone Print > Output would be a mix of chorus, delay, flanger and an overdrive Tone Print from the amp. I guess I am wrong lol