Ok. So for now I like this set up best for me.
Bass->GT1B->M80->M87.
For metal tones in bypassing the GT1B for the M80 and M87 to utilize the noise gate and compression in conjunction with the knobs on my bass. Obviously bypassing means I have always on tuner going through the gt1b in this set up. I like the compressor at the end just to polish things up. I feel I was able to adjust the settings so it defined the notes better with and without dirt. I like the compressor as an always on and I don't want to have to make huge adjustments, prefer set it and forget it.
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Clean tones I'll run the 360 preamp from the gt1b along with the clean EQ on the M80 and light compression from the M87 again just to polish up the last bit before it hits my amp.
For deep vintage tones I'll use my amp settings and the "old school" knob, generally if I'm playing a song in this style there's no switching tones if any i would roll from neck to bridge pickups for a little solo or jazzy part.
Current button assignments are
Down FX1 I have chorus
Up FX2 is Flanger
CTL1 OD won't use this much as the M80 has it handled
Hard Press Expression Pedal to activate the Preamp
A button is for Bypass/Tuner
B button is nothing as I goofed and didn't buy a TRS patch cable so I can use both. That will be corrected asap and I'll most likely use it for a delay
:::EDIT::: I realized I could use another cable and connect the B button to my amp to activate my EQ 2. which is perfect as that is where I would need to adjust my amp for old school vintage tones. Now I can set that where I want and stomp to pull it up.